![]() 04Dec2021, LocalColabFold is now compatible with the latest pip installable ColabFold.Please use a new option -use-gpu-relax if GPU relaxation is required (recommended). The base directory has been changed to localcolabfold from colabfold_batch to distinguish it from the execution command. 30APr2023, Updated to use python 3.10 for compatibility with Google Colaboratory.I recommend to install Localcolabfold freshly. NOT necessary to prepare the large database required for native AlphaFold2.ĬolabFold now upgrade to 1.5.0 (compatible with AlphaFold 2.3.1).Structure inference and relaxation will be accelerated if your PC has Nvidia GPU and CUDA drivers.Localcolabfold is suitable for more advanced applications such as batch processing of structure predictions for non-natural proteins and complexes, or predictions with manually specified MSAs / templates. If you only want to predict a small number of naturally occuring proteins, I recommend using ColabFold notebook or download the structures from AlphaFold Protein Structure Database or UniProt. It supports wide range of operating systems, such as Windows 10 or later (using Windows Subsystem for Linux 2), macOS, and Linux. ![]() LocalColabFold is an installer script designed to make ColabFold functionality available on users' local machines. ![]()
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